COMBINATORIAL_BLAS  1.6
BitMap.h
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1 /****************************************************************/
2 /* Parallel Combinatorial BLAS Library (for Graph Computations) */
3 /* version 1.4 -------------------------------------------------*/
4 /* date: 1/17/2014 ---------------------------------------------*/
5 /* authors: Aydin Buluc (abuluc@lbl.gov), Adam Lugowski --------*/
6 /* this file contributed by Scott Beamer of UC Berkeley --------*/
7 /****************************************************************/
8 /*
9  Copyright (c) 2010-2014, The Regents of the University of California
10 
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29 
30 #ifndef BITMAP_H
31 #define BITMAP_H
32 
33 #include <stdint.h>
34 
35 #define WORD_OFFSET(n) (n/64)
36 #define BIT_OFFSET(n) (n & 0x3f)
37 
38 namespace combblas {
39 
40 class BitMap {
41  public:
42  // actually always rounds up
43  BitMap() { start = NULL; end = NULL;}; // default constructor
44 
45  BitMap(uint64_t size) {
46  uint64_t num_longs = (size + 63) / 64;
47  // VS9: warning C4244: 'initializing' : conversion from 'uint64_t' to 'unsigned int', possible loss of data
48  start = new uint64_t[num_longs](); // zero initialized by default
49  end = start + num_longs;
50  }
51 
52  ~BitMap() {
53  delete[] start;
54  }
55  BitMap(const BitMap & rhs)
56  {
57  uint64_t num_longs = rhs.end - rhs.start;
58  // VS9: warning C4244: 'initializing' : conversion from 'uint64_t' to 'unsigned int', possible loss of data
59  start = new uint64_t[num_longs];
60  end = start + num_longs;
61  std::copy(rhs.start, rhs.end, start);
62  }
63  BitMap & operator= (const BitMap & rhs)
64  {
65  if(this != &rhs)
66  {
67  delete [] start;
68  uint64_t num_longs = rhs.end - rhs.start;
69  // VS9: warning C4244: 'initializing' : conversion from 'uint64_t' to 'unsigned int', possible loss of data
70  start = new uint64_t[num_longs];
71  end = start + num_longs;
72  std::copy(rhs.start, rhs.end, start);
73  }
74  return *this;
75  }
76 
77 
78  inline
79  void reset() {
80  for(uint64_t *it=start; it!=end; it++)
81  *it = 0;
82  }
83 
84  inline
85  void set_bit(uint64_t pos) {
86  start[WORD_OFFSET(pos)] |= ( static_cast<uint64_t>(1l)<<BIT_OFFSET(pos));
87  }
88 
89  inline
90  void reset_bit(uint64_t pos) {
91  start[WORD_OFFSET(pos)] &= ~( static_cast<uint64_t>(1l)<<BIT_OFFSET(pos));
92  }
93 
94  inline
95  void set_bit_atomic(long pos) {
96  set_bit(pos);
97  // uint64_t old_val, new_val;
98  // uint64_t *loc = start + WORD_OFFSET(pos);
99  // do {
100  // old_val = *loc;
101  // new_val = old_val | ((uint64_t) 1l<<BIT_OFFSET(pos));
102  // } while(!__sync_bool_compare_and_swap(loc, old_val, new_val));
103  }
104 
105  inline
106  bool get_bit(uint64_t pos) {
107 // VS9: warning C4334: '<<' : result of 32-bit shift implicitly converted to 64 bits (was 64-bit shift intended?)
108  if (start[WORD_OFFSET(pos)] & ( static_cast<uint64_t>(1l) <<BIT_OFFSET(pos)))
109  return true;
110  else
111  return false;
112  }
113 
114  inline
115  long get_next_bit(uint64_t pos) {
116  uint64_t next = pos;
117  int bit_offset = BIT_OFFSET(pos);
118  uint64_t *it = start + WORD_OFFSET(pos);
119  uint64_t temp = (*it);
120  if (bit_offset != 63) {
121  temp = temp >> (bit_offset+1);
122  } else {
123  temp = 0;
124  }
125  if (!temp) {
126  next = (next & 0xffffffc0);
127  while (!temp) {
128  it++;
129  if (it >= end)
130  return -1;
131  temp = *it;
132  next += 64;
133  }
134  } else {
135  next++;
136  }
137  while(!(temp&1)) {
138  temp = temp >> 1;
139  next++;
140  }
141  return next;
142  }
143 
144  inline
145  uint64_t* data() {
146  return start;
147  }
148 
149  void copy_from(const BitMap* other) {
150  std::copy(other->start, other->end, start);
151  }
152 
153  void print_ones() {
154  uint64_t max_size = (end-start)*64;
155  for (uint64_t i=0; i<max_size; i++)
156  if (get_bit(i))
157  std::cout << " " << i;
158  std::cout << std::endl;
159  }
160 
161  private:
162  uint64_t *start;
163  uint64_t *end;
164 };
165 
166 }
167 
168 #endif // BITMAP_H
void copy_from(const BitMap *other)
Definition: BitMap.h:149
#define BIT_OFFSET(n)
Definition: BitMap.h:36
bool get_bit(uint64_t pos)
Definition: BitMap.h:106
long get_next_bit(uint64_t pos)
Definition: BitMap.h:115
int size
BitMap(const BitMap &rhs)
Definition: BitMap.h:55
uint64_t * data()
Definition: BitMap.h:145
void set_bit_atomic(long pos)
Definition: BitMap.h:95
BitMap & operator=(const BitMap &rhs)
Definition: BitMap.h:63
BitMap(uint64_t size)
Definition: BitMap.h:45
void reset()
Definition: BitMap.h:79
void reset_bit(uint64_t pos)
Definition: BitMap.h:90
#define WORD_OFFSET(n)
Definition: BitMap.h:35
Definition: CCGrid.h:4
void set_bit(uint64_t pos)
Definition: BitMap.h:85
void print_ones()
Definition: BitMap.h:153