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Computational Research Division
Computer Science Department
Mailstop 50F1650
Lawrence Berkeley National Laboratory

I am a Staff Scientist at the Lawrence Berkeley National Lab and Adjunct Assistant Professor of EECS at UC Berkeley. I work on high-performance graph analysis and libraries, parallel sparse matrix computations, communication-avoiding algorithms, with applications in computational genomics and biology. Previously, I was an Alvarez Fellow. Up to date information about my research can be found at my research team's website: PASSION Lab.

I obtained my Ph.D. from UC Santa Barbara in Computer Science. My unusually shallow genealogy includes only three lineal ascendants. You can pronounce my first name like this. The "ı" in my first name is a lowercase dotless i ({\i} in LaTeX, ı in HTML and U+0131 in UTF-8).

Current Projects: EDGAR, ExaBiome, ExaGraph, COGNAC, RAPIDS, QAT4Chem, BINOCULARS.


-- In Spring 2019, I am team teaching CS267: Applications of Parallel Computers with Jim Demmel and Kathy Yelick.


-- My research team finally has a website: PASSION Lab

-- HipMCL clusters protein similarity networks with 70 billion edges in a couple of hours. This highly-scalable implementation of the Markov Cluster algorithm is available open source. Here is an accessible press release.