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@InProceedings{srivastava-iwbda12,
author = {Saurabh Srivastava and Jonathan Kotker and Stephi Hamilton and Paul Ruan and Jeff Tsui and J. Christopher Anderson and Rastislav Bodik and Sanjit A. Seshia},
title = {Pathway Synthesis Using the Act Ontology},
booktitle = {Proceedings of the 4th International Workshop on Bio-Design Automation (IWBDA)},
month = {June},
year = {2012},
abstract = {We describe here the Act Ontology, a formalism for uniformly
describing biochemical function, and its use in building an enzymatic pathway synthesizer.
A formal description of biochemical function allows us to reason about it, and,
for the particular case of enzymes, this function allows us
to build a synthesizer tool that given a target chemical can
automatically infer the most likely pathway that leads to
it. The pathway can include known as well as hypothetical
enzymes with predicted function.},
}